PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6BS_05264DAEA.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 353aa    MW: 37231.4 Da    PI: 6.6115
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6BS_05264DAEA.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.42.8e-22250312163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elk+++rk +NRe+ArrsR+RK+ae+eeL +++++L++eN++L+ el+++kke+++l s++
  Traes_6BS_05264DAEA.2 250 ERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKN 312
                            89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.6E-25196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.3E-21123232No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-15248309No hitNo description
PfamPF001701.5E-20250312IPR004827Basic-leucine zipper domain
SMARTSM003381.9E-20250314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.875252315IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10253309No hitNo description
CDDcd147022.02E-23255305No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MGSNDPSTPS KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA  60
HPYMWGPQHM VPPYGTPPPP YMMYPPGTVY AHPTAPGVHP FHYPMQTNGN LEPAGAQGAA  120
PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENGSAQ  180
NGVSHSSSHG TFNKPMPLVP VQSGAVIGVA GPATNLNIGM DYWGATGSSP VPAMRGKVPS  240
GSARGEQWDE RELKKQKRKL SNRESARRSR LRKQAECEEL GQRAEALKSE NSSLRIELDR  300
IKKEYEELLS KNTSLKAKLG ESGGGGGSDA VPDMNERGXX XXXXAAATRR SPD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252259LKKQKRKL
2266272RRSRLRK
3266273RRSRLRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1A0.0M28704.1 Wheat sequence-specific DNA binding protein mRNA, complete cds.
GenBankX567810.0X56781.1 T.aestivum 1a-17 gene for HBP-1a (leucine zipper type transcription factor).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236255.10.0PREDICTED: uncharacterized protein LOC100826051
SwissprotP239220.0HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLW5GP070.0W5GP07_WHEAT; Uncharacterized protein
STRINGBRADI3G02730.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.17e-48basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]